IL_4WT8_051

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCAC*GGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_051 not in the Motif Atlas

Geometric match to IL_5J7L_256

Geometric discrepancy: 0.3175

The information below is about IL_5J7L_256

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

4WT8|1|Ab|C|1241
4WT8|1|Ab|C|1242
4WT8|1|Ab|A|1243
4WT8|1|Ab|C|1244
*
4WT8|1|Ab|G|1255
4WT8|1|Ab|G|1256
4WT8|1|Ab|A|1257
4WT8|1|Ab|G|1258

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AW

30S ribosomal protein Thx