IL_4WT8_123
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_123 not in the Motif Atlas
- Homologous match to IL_7RQB_001
- Geometric discrepancy: 0.0671
- The information below is about IL_7RQB_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.6
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WT8|1|C1|G|23
4WT8|1|C1|U|24
4WT8|1|C1|G|25
4WT8|1|C1|G|26
4WT8|1|C1|A|27
4WT8|1|C1|U|28
4WT8|1|C1|G|29
*
4WT8|1|C1|C|534
4WT8|1|C1|U|535
4WT8|1|C1|G|536
4WT8|1|C1|A|537
4WT8|1|C1|A|538
4WT8|1|C1|A|539
4WT8|1|C1|C|540
Current chains
- Chain C1
- 23S rRNA (2899-MER)
Nearby chains
- Chain C6
- 50S ribosomal protein L32
- Chain CT
- 50S ribosomal protein L20
- Chain CW
- 50S ribosomal protein L22
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