IL_4WT8_147

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGC*GGAG

Length

7 nucleotides

Bulged bases

4WT8|1|C1|G|976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_147 not in the Motif Atlas

Geometric match to IL_7RQB_025

Geometric discrepancy: 0.3176

The information below is about IL_7RQB_025

Detailed Annotation

Intercalated cWW

Broad Annotation

Intercalated cWW

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4WT8|1|C1|C|890
4WT8|1|C1|G|891
4WT8|1|C1|C|892
*
4WT8|1|C1|G|975
4WT8|1|C1|G|976
4WT8|1|C1|A|977
4WT8|1|C1|G|978

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CL

50S ribosomal protein L30