IL_4WT8_169
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_169 not in the Motif Atlas
- Homologous match to IL_7RQB_049
- Geometric discrepancy: 0.0702
- The information below is about IL_7RQB_049
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.7
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4WT8|1|C1|A|1307
4WT8|1|C1|U|1308
4WT8|1|C1|G|1309
4WT8|1|C1|A|1310
4WT8|1|C1|G|1311
4WT8|1|C1|U|1312
4WT8|1|C1|A|1313
4WT8|1|C1|A|1314
*
4WT8|1|C1|U|2032
4WT8|1|C1|G|2033
4WT8|1|C1|A|2034
4WT8|1|C1|A|2035
4WT8|1|C1|A|2036
4WT8|1|C1|U|2037
4WT8|1|C1|U|2038
Current chains
- Chain C1
- 23S rRNA (2899-MER)
Nearby chains
- Chain C6
- 50S ribosomal protein L32
- Chain CD
- 50S ribosomal protein L4
- Chain CW
- 50S ribosomal protein L22
Coloring options: