IL_4WT8_183

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_183 not in the Motif Atlas

Homologous match to IL_7RQB_064

Geometric discrepancy: 0.0935

The information below is about IL_7RQB_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.2

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

4WT8|1|C1|G|1697
4WT8|1|C1|A|1698
4WT8|1|C1|G|1699
4WT8|1|C1|A|1700
4WT8|1|C1|A|1701
4WT8|1|C1|C|1702
*
4WT8|1|C1|G|2025
4WT8|1|C1|A|2026
4WT8|1|C1|C|2027

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CC

50S ribosomal protein L3

Chain CQ

50S ribosomal protein L17