IL_4WT8_255

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_255 not in the Motif Atlas

Geometric match to IL_7RQB_015

Geometric discrepancy: 0.0668

The information below is about IL_7RQB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

4WT8|1|D1|C|586
4WT8|1|D1|C|587
4WT8|1|D1|U|588
*
4WT8|1|D1|A|597
4WT8|1|D1|U|598
4WT8|1|D1|G|599

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DC

50S ribosomal protein L3

Chain DO

50S ribosomal protein L15

Chain DT

50S ribosomal protein L20

Chain DU

50S ribosomal protein L21