IL_4WT8_302

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CAA*UCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_302 not in the Motif Atlas

Homologous match to IL_7A0S_060

Geometric discrepancy: 0.0741

The information below is about IL_7A0S_060

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

4WT8|1|D1|C|1709
4WT8|1|D1|A|1710
4WT8|1|D1|A|1711
*
4WT8|1|D1|U|2016
4WT8|1|D1|C|2017
4WT8|1|D1|G|2018

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DC

50S ribosomal protein L3

Chain DN

50S ribosomal protein L14

Chain DS

50S ribosomal protein L19