IL_4WT8_307
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- UGCGAAC*GGAGGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 4WT8|1|D1|G|1831, 4WT8|1|D1|G|1846, 4WT8|1|D1|U|1850
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_307 not in the Motif Atlas
- Homologous match to IL_7RQB_070
- Geometric discrepancy: 0.0579
- The information below is about IL_7RQB_070
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.3
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WT8|1|D1|U|1828
4WT8|1|D1|G|1829
4WT8|1|D1|C|1830
4WT8|1|D1|G|1831
4WT8|1|D1|A|1832
4WT8|1|D1|A|1833
4WT8|1|D1|C|1834
*
4WT8|1|D1|G|1843
4WT8|1|D1|G|1844
4WT8|1|D1|A|1845
4WT8|1|D1|G|1846
4WT8|1|D1|G|1847
4WT8|1|D1|U|1848
4WT8|1|D1|A|1849
4WT8|1|D1|U|1850
4WT8|1|D1|A|1851
Current chains
- Chain D1
- 23S rRNA (2899-MER)
Nearby chains
- Chain Bb
- Small subunit ribosomal RNA; SSU rRNA
- Chain DB
- 50S ribosomal protein L2
Coloring options: