IL_4WT8_322

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUGCGUAGGAUAG*CCUG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT8|1|D1|C|2129
4WT8|1|D1|U|2130
4WT8|1|D1|G|2131
4WT8|1|D1|C|2132
4WT8|1|D1|G|2133
4WT8|1|D1|U|2134
4WT8|1|D1|A|2135
4WT8|1|D1|G|2136
4WT8|1|D1|G|2137
4WT8|1|D1|A|2138
4WT8|1|D1|U|2139
4WT8|1|D1|A|2140
4WT8|1|D1|G|2141
*
4WT8|1|D1|C|2199
4WT8|1|D1|C|2200
4WT8|1|D1|U|2201
4WT8|1|D1|G|2202

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain Ab

Small subunit ribosomal RNA; SSU rRNA

Chain D3

Transfer RNA; tRNA

Chain DA

50S ribosomal protein L1