IL_4WT8_348

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUU*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WT8_348 not in the Motif Atlas

Geometric match to IL_5VCI_005

Geometric discrepancy: 0.3265

The information below is about IL_5VCI_005

Detailed Annotation

Not an internal loop

Broad Annotation

Not an internal loop

Motif group

IL_64417.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

18

Unit IDs

4WT8|1|D3|C|49
4WT8|1|D3|U|50
4WT8|1|D3|U|51
*
4WT8|1|D3|G|63
4WT8|1|D3|A|64
4WT8|1|D3|G|65

Current chains

Chain D3

A site tNA, E site tNA

Nearby chains

Chain D7

50S ribosomal protein L33

Chain DA

50S ribosomal protein L1