IL_4WT8_350
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AUAG*CAGGGGAUUGAAAAUUCCGAGU
- Length
- 26 nucleotides
- Bulged bases
- 4WT8|1|DV|U|8, 4WT8|1|DV|A|9
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44519.1
- Basepair signature
- cWW-R-L-L-L-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
4WT8|1|DV|A|7
4WT8|1|DV|U|8
4WT8|1|DV|A|9
4WT8|1|DV|G|10
*
4WT8|1|DV|C|25
4WT8|1|DV|A|26
4WT8|1|DV|G|27
4WT8|1|DV|G|28
4WT8|1|DV|G|29
4WT8|1|DV|G|30
4WT8|1|DV|A|31
4WT8|1|DV|U|32
4WT8|1|DV|U|33
4WT8|1|DV|G|34
4WT8|1|DV|A|35
4WT8|1|DV|A|36
4WT8|1|DV|A|37
4WT8|1|DV|A|38
4WT8|1|DV|U|39
4WT8|1|DV|U|40
4WT8|1|DV|C|41
4WT8|1|DV|C|42
4WT8|1|DV|G|43
4WT8|1|DV|A|44
4WT8|1|DV|G|45
4WT8|1|DV|U|46
Current chains
- Chain DV
- DNA (55-MER)
Nearby chains
- Chain B2
- mRNA
- Chain BL
- 30S ribosomal protein S12
- Chain BM
- 30S ribosomal protein S13
- Chain Bb
- Small subunit ribosomal RNA; SSU rRNA
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D2
- tRNA (5'-D(*AP*UP*CP*CP*CP*CP*GP*UP*GP*UP*CP*CP*UP*UP*GP*GP*UP*UP*CP*G)-3')
- Chain DP
- 50S ribosomal protein L16
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