3D structure

PDB id
4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
UGGU*ACACA
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4WT8|1|Bb|U|930
4WT8|1|Bb|G|931
4WT8|1|Bb|G|932
4WT8|1|Bb|U|933
*
4WT8|1|Bb|A|1207
4WT8|1|Bb|C|1208
4WT8|1|Bb|A|1209
4WT8|1|Bb|C|1210
4WT8|1|Bb|A|1211

Current chains

Chain Bb
RNA (1504-MER)

Nearby chains

Chain BM
30S ribosomal protein S13
Chain BT
30S ribosomal protein S19
Chain D2
tRNA (5'-D(*AP*UP*CP*CP*CP*CP*GP*UP*GP*UP*CP*CP*UP*UP*GP*GP*UP*UP*CP*G)-3')
Chain D4
Transfer RNA; tRNA
Chain DV
Transfer RNA; tRNA

Coloring options:

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