IL_4WT8_366

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GAUGCCAC*GGAGCUAAUC

Length

18 nucleotides

Bulged bases

4WT8|1|Bb|U|1239, 4WT8|1|Bb|C|1242, 4WT8|1|Bb|U|1260, 4WT8|1|Bb|A|1262, 4WT8|1|Bb|U|1263

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT8|1|Bb|G|1237
4WT8|1|Bb|A|1238
4WT8|1|Bb|U|1239
4WT8|1|Bb|G|1240
4WT8|1|Bb|C|1241
4WT8|1|Bb|C|1242
4WT8|1|Bb|A|1243
4WT8|1|Bb|C|1244
*
4WT8|1|Bb|G|1255
4WT8|1|Bb|G|1256
4WT8|1|Bb|A|1257
4WT8|1|Bb|G|1258
4WT8|1|Bb|C|1259
4WT8|1|Bb|U|1260
4WT8|1|Bb|A|1261
4WT8|1|Bb|A|1262
4WT8|1|Bb|U|1263
4WT8|1|Bb|C|1264

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BI

30S ribosomal protein S9

Chain BJ

30S ribosomal protein S10

Chain BN

30S ribosomal protein S14 type Z

Chain BW

30S ribosomal protein Thx