IL_4WU1_158
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CAG*CGGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WU1_158 not in the Motif Atlas
- Geometric match to IL_7RQB_088
- Geometric discrepancy: 0.2325
- The information below is about IL_7RQB_088
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.7
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4WU1|1|14|C|2297
4WU1|1|14|A|2298
4WU1|1|14|G|2299
*
4WU1|1|14|C|2317
4WU1|1|14|G|2318
4WU1|1|14|G|2319
4WU1|1|14|A|2320
4WU1|1|14|G|2321
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 1J
- 5S ribosomal RNA; 5S rRNA
- Chain 49
- 50S ribosomal protein L5
- Chain 65
- 50S ribosomal protein L18
- Chain E5
- 50S ribosomal protein L27
Coloring options: