IL_4WU1_208
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGCCAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WU1_208 not in the Motif Atlas
- Homologous match to IL_4LFB_020
- Geometric discrepancy: 0.1067
- The information below is about IL_4LFB_020
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
4WU1|1|1G|C|504
4WU1|1|1G|G|505
4WU1|1|1G|G|506
4WU1|1|1G|C|507
4WU1|1|1G|C|508
4WU1|1|1G|A|509
4WU1|1|1G|A|510
4WU1|1|1G|C|511
*
4WU1|1|1G|G|540
4WU1|1|1G|G|541
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
- Chain 3A
- 30S ribosomal protein S12
Coloring options: