IL_4WWW_030

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

4WWW|1|QA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_030 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.0758

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

4WWW|1|QA|C|569
4WWW|1|QA|G|570
4WWW|1|QA|U|571
4WWW|1|QA|A|572
4WWW|1|QA|A|573
4WWW|1|QA|A|574
4WWW|1|QA|G|575
*
4WWW|1|QA|C|880
4WWW|1|QA|G|881

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QH

30S ribosomal protein S8

Chain QL

30S ribosomal protein S12

Chain QQ

30S ribosomal protein S17