IL_4WWW_071
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WWW_071 not in the Motif Atlas
- Homologous match to IL_5J7L_245
- Geometric discrepancy: 0.0536
- The information below is about IL_5J7L_245
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WWW|1|RA|G|24
4WWW|1|RA|U|25
4WWW|1|RA|G|26
4WWW|1|RA|G|27
4WWW|1|RA|A|28
4WWW|1|RA|U|29
4WWW|1|RA|G|30
*
4WWW|1|RA|C|510
4WWW|1|RA|U|511
4WWW|1|RA|G|512
4WWW|1|RA|A|513
4WWW|1|RA|A|514
4WWW|1|RA|A|515
4WWW|1|RA|C|516
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R0
- 50S ribosomal protein L32
- Chain RQ
- 50S ribosomal protein L20
- Chain RS
- 50S ribosomal protein L22
Coloring options: