3D structure

PDB id
4WWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to CEM-101
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
CCG*CUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WWW_086 not in the Motif Atlas
Homologous match to IL_7RQB_017
Geometric discrepancy: 0.0526
The information below is about IL_7RQB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_86319.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
270

Unit IDs

4WWW|1|RA|C|672
4WWW|1|RA|C|673
4WWW|1|RA|G|674
*
4WWW|1|RA|C|806
4WWW|1|RA|U|807
4WWW|1|RA|G|808

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RE
50S ribosomal protein L4
Chain RL
50S ribosomal protein L15

Coloring options:


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