IL_4WWW_151

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

4WWW|1|RA|A|2439

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_151 not in the Motif Atlas

Homologous match to IL_5J7L_324

Geometric discrepancy: 0.063

The information below is about IL_5J7L_324

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

4WWW|1|RA|A|2070
4WWW|1|RA|A|2071
*
4WWW|1|RA|U|2438
4WWW|1|RA|A|2439
4WWW|1|RA|C|2440
4WWW|1|RA|U|2441

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RC

50S ribosomal protein L2