IL_4WWW_157

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUG*UGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_157 not in the Motif Atlas

Geometric match to IL_4WF9_044

Geometric discrepancy: 0.3

The information below is about IL_4WF9_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.3

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

20

Unit IDs

4WWW|1|RA|G|2138
4WWW|1|RA|U|2139
4WWW|1|RA|G|2140
*
4WWW|1|RA|U|2151
4WWW|1|RA|G|2152
4WWW|1|RA|C|2153

Current chains

Chain RA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA