IL_4WWW_182

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_182 not in the Motif Atlas

Homologous match to IL_5J7L_354

Geometric discrepancy: 0.0608

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

4WWW|1|RA|U|2847
4WWW|1|RA|G|2848
4WWW|1|RA|U|2849
4WWW|1|RA|A|2850
4WWW|1|RA|A|2851
4WWW|1|RA|G|2852
*
4WWW|1|RA|U|2865
4WWW|1|RA|U|2866
4WWW|1|RA|G|2867
4WWW|1|RA|A|2868
4WWW|1|RA|G|2869

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RN

50S ribosomal protein L17

Chain RP

50S ribosomal protein L19