IL_4WWW_206

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_206 not in the Motif Atlas

Homologous match to IL_4LFB_015

Geometric discrepancy: 0.1336

The information below is about IL_4LFB_015

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

4WWW|1|XA|A|371
4WWW|1|XA|C|372
4WWW|1|XA|A|373
4WWW|1|XA|A|374
4WWW|1|XA|U|375
*
4WWW|1|XA|A|389
4WWW|1|XA|U|390

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16