3D structure

PDB id
4WWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to CEM-101
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GAG*CUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary: GAG,CUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WWW_213 not in the Motif Atlas
Geometric match to IL_4V9K_064
Geometric discrepancy: 0.2611
The information below is about IL_4V9K_064
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_87907.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
179

Unit IDs

4WWW|1|XA|G|455
4WWW|1|XA|A|456
4WWW|1|XA|G|457
*
4WWW|1|XA|C|475
4WWW|1|XA|U|476
4WWW|1|XA|C|477

Current chains

Chain XA
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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