IL_4WWW_240

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UG*CAA

Length

5 nucleotides

Bulged bases

4WWW|1|XA|A|1196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_240 not in the Motif Atlas

Homologous match to IL_5J7L_049

Geometric discrepancy: 0.1264

The information below is about IL_5J7L_049

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

4WWW|1|XA|U|1060
4WWW|1|XA|G|1061
*
4WWW|1|XA|C|1195
4WWW|1|XA|A|1196
4WWW|1|XA|A|1197

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XC

30S ribosomal protein S3

Chain XE

30S ribosomal protein S5

Chain XJ

30S ribosomal protein S10

Chain XN

30S ribosomal protein S14