IL_4WWW_325
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 4WWW|1|YA|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WWW_325 not in the Motif Atlas
- Homologous match to IL_5J7L_308
- Geometric discrepancy: 0.0706
- The information below is about IL_5J7L_308
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WWW|1|YA|C|1686
4WWW|1|YA|G|1687
4WWW|1|YA|U|1688
4WWW|1|YA|A|1689
4WWW|1|YA|A|1690
4WWW|1|YA|C|1691
*
4WWW|1|YA|G|1696
4WWW|1|YA|G|1697
4WWW|1|YA|A|1698
4WWW|1|YA|G|1699
4WWW|1|YA|A|1700
4WWW|1|YA|A|1701
4WWW|1|YA|G|1702
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain YC
- 50S ribosomal protein L2
Coloring options: