IL_4WWW_352
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUAC*GUGUUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WWW_352 not in the Motif Atlas
- Geometric match to IL_8P9A_467
- Geometric discrepancy: 0.3745
- The information below is about IL_8P9A_467
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07469.2
- Basepair signature
- cWW-tSH-cWW-cSH-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4WWW|1|YA|A|2459
4WWW|1|YA|U|2460
4WWW|1|YA|A|2461
4WWW|1|YA|C|2462
*
4WWW|1|YA|G|2488
4WWW|1|YA|U|2489
4WWW|1|YA|G|2490
4WWW|1|YA|U|2491
4WWW|1|YA|U|2492
4WWW|1|YA|U|2493
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YM
- 50S ribosomal protein L16
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