IL_4WWW_377

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGG*CUU

Length

7 nucleotides

Bulged bases

4WWW|1|QA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_377 not in the Motif Atlas

Geometric match to IL_6IA2_001

Geometric discrepancy: 0.1504

The information below is about IL_6IA2_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4WWW|1|QA|G|925
4WWW|1|QA|G|926
4WWW|1|QA|G|927
4WWW|1|QA|G|928
*
4WWW|1|QA|C|1389
4WWW|1|QA|U|1390
4WWW|1|QA|U|1391

Current chains

Chain QA

16S rRNA

Nearby chains