IL_4WWW_389
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WWW_389 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0932
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
4WWW|1|XA|A|673
4WWW|1|XA|G|674
4WWW|1|XA|A|675
4WWW|1|XA|A|676
4WWW|1|XA|U|677
*
4WWW|1|XA|G|713
4WWW|1|XA|G|714
4WWW|1|XA|A|715
4WWW|1|XA|A|716
4WWW|1|XA|U|717
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XF
- 30S ribosomal protein S6
- Chain XK
- 30S ribosomal protein S11
- Chain XR
- 30S ribosomal protein S18
- Chain XU
- 30S ribosomal protein S21
- Chain YC
- 50S ribosomal protein L2
Coloring options: