IL_4WZD_095
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_095 not in the Motif Atlas
- Homologous match to IL_9DFE_026
- Geometric discrepancy: 0.0965
- The information below is about IL_9DFE_026
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.4
- Basepair signature
- cWW-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WZD|1|14|U|858||||P_1
4WZD|1|14|G|859||||P_1
4WZD|1|14|U|860||||P_1
4WZD|1|14|A|861||||P_1
4WZD|1|14|G|862||||P_1
*
4WZD|1|14|C|915||||P_1
4WZD|1|14|G|916||||P_1
4WZD|1|14|A|917||||P_1
4WZD|1|14|A|918||||P_1
4WZD|1|14|G|919||||P_1
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 1J
- 5S ribosomal RNA; 5S rRNA
- Chain 45
- 50S ribosomal protein L16
- Chain E5
- 50S ribosomal protein L27
- Chain H5
- 50S ribosomal protein L30
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