IL_4WZD_107
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 4WZD|1|14|A|1046||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_107 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.5848
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
4WZD|1|14|C|1043||||P_1
4WZD|1|14|G|1044||||P_1
4WZD|1|14|A|1045||||P_1
4WZD|1|14|A|1046||||P_1
4WZD|1|14|G|1047||||P_1
4WZD|1|14|A|1048||||P_1
4WZD|1|14|C|1049||||P_1
4WZD|1|14|A|1050||||P_1
4WZD|1|14|G|1051||||P_1
*
4WZD|1|14|U|1108||||P_1
4WZD|1|14|C|1109||||P_1
4WZD|1|14|G|1110||||P_1
4WZD|1|14|A|1111||||P_1
4WZD|1|14|G|1112||||P_1
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 59
- 50S ribosomal protein L6
Coloring options: