IL_4WZD_203
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 4WZD|1|1G|A|532||||P_1, 4WZD|1|1G|U|534||||P_1, 4WZD|1|1G|A|535||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_203 not in the Motif Atlas
- Homologous match to IL_4LFB_021
- Geometric discrepancy: 0.1761
- The information below is about IL_4LFB_021
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.4
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WZD|1|1G|G|515||||P_1
4WZD|1|1G|U|516||||P_1
4WZD|1|1G|G|517||||P_1
4WZD|1|1G|C|518||||P_1
4WZD|1|1G|C|519||||P_1
4WZD|1|1G|A|520||||P_1
4WZD|1|1G|G|521||||P_1
*
4WZD|1|1G|C|528||||P_1
4WZD|1|1G|G|529||||P_1
4WZD|1|1G|G|530||||P_1
4WZD|1|1G|U|531||||P_1
4WZD|1|1G|A|532||||P_1
4WZD|1|1G|A|533||||P_1
4WZD|1|1G|U|534||||P_1
4WZD|1|1G|A|535||||P_1
4WZD|1|1G|C|536||||P_1
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 22
- 30S ribosomal protein S3
- Chain 32
- 30S ribosomal protein S4
- Chain 3A
- 30S ribosomal protein S12
Coloring options: