IL_4WZD_335
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAG*CGCCGGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- 4WZD|1|1H|U|2167||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WZD_335 not in the Motif Atlas
- Homologous match to IL_3U4M_003
- Geometric discrepancy: 0.5287
- The information below is about IL_3U4M_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
4WZD|1|1H|G|2124||||P_1
4WZD|1|1H|G|2125||||P_1
4WZD|1|1H|A|2126||||P_1
4WZD|1|1H|G|2127||||P_1
*
4WZD|1|1H|C|2161||||P_1
4WZD|1|1H|G|2162||||P_1
4WZD|1|1H|C|2163||||P_1
4WZD|1|1H|C|2164||||P_1
4WZD|1|1H|G|2165||||P_1
4WZD|1|1H|G|2166||||P_1
4WZD|1|1H|U|2167||||P_1
4WZD|1|1H|G|2168||||P_1
4WZD|1|1H|A|2169||||P_1
4WZD|1|1H|A|2170||||P_1
4WZD|1|1H|A|2171||||P_1
4WZD|1|1H|U|2172||||P_1
4WZD|1|1H|A|2173||||P_1
4WZD|1|1H|C|2174||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 3K
- Transfer RNA; tRNA
- Chain 71
- 50S ribosomal protein L1
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