IL_4WZM_001

3D structure

PDB id

4WZM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mutant K18E of RNA dependent RNA polymerase from Foot-and-Mouth Disease Virus complexed with RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.52 Å

Loop

Sequence

GGC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Isolated cWH basepair

Broad Annotation

Isolated cWH basepair

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4WZM|1|B|G|906
4WZM|1|B|G|907
4WZM|1|B|C|908
*
4WZM|1|C|G|917
4WZM|1|C|C|918
4WZM|1|C|C|919

Current chains

Chain B

RNA template

Chain C

RNA primer

Nearby chains

Chain A

RNA dependent RNA polymerase