3D structure

PDB id
4WZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-fMet and mRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GAGUAG*CGCAGAUAC
Length
15 nucleotides
Bulged bases
4WZO|1|13|A|702
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WZO_033 not in the Motif Atlas
Homologous match to IL_4LFB_031
Geometric discrepancy: 0.1125
The information below is about IL_4LFB_031
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_95727.1
Basepair signature
cWW-L-tSH-L-tHW-tHS-R-cWW-L
Number of instances in this motif group
1

Unit IDs

4WZO|1|13|G|683
4WZO|1|13|A|684
4WZO|1|13|G|685
4WZO|1|13|U|686
4WZO|1|13|A|687
4WZO|1|13|G|688
*
4WZO|1|13|C|699
4WZO|1|13|G|700
4WZO|1|13|C|701
4WZO|1|13|A|702
4WZO|1|13|G|703
4WZO|1|13|A|704
4WZO|1|13|U|705
4WZO|1|13|A|706
4WZO|1|13|C|707

Current chains

Chain 13
16S ribosomal RNA

Nearby chains

Chain 1H
Large subunit ribosomal RNA; LSU rRNA
Chain 2I
30S ribosomal protein S11

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3788 s