IL_4WZO_044

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCC*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GCC,GGC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_044 not in the Motif Atlas

Geometric match to IL_1Y27_001

Geometric discrepancy: 0.1819

The information below is about IL_1Y27_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4WZO|1|13|G|988
4WZO|1|13|C|989
4WZO|1|13|C|990
*
4WZO|1|13|G|1215
4WZO|1|13|G|1216
4WZO|1|13|C|1217

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 5I

30S ribosomal protein S14 type Z

Chain AI

30S ribosomal protein S19