IL_4WZO_046

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UAGG*CCUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UAGG,CCUA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_046 not in the Motif Atlas

Geometric match to IL_1D4R_001

Geometric discrepancy: 0.2741

The information below is about IL_1D4R_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

4WZO|1|13|U|999
4WZO|1|13|A|1000
4WZO|1|13|G|1001
4WZO|1|13|G|1002
*
4WZO|1|13|C|1038
4WZO|1|13|C|1039
4WZO|1|13|U|1040
4WZO|1|13|A|1041

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 14

Large subunit ribosomal RNA; LSU rRNA