IL_4WZO_053

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_053 not in the Motif Atlas

Geometric match to IL_4LFB_047

Geometric discrepancy: 0.1048

The information below is about IL_4LFB_047

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

4WZO|1|13|G|1061
4WZO|1|13|U|1062
4WZO|1|13|C|1063
*
4WZO|1|13|G|1193
4WZO|1|13|U|1194
4WZO|1|13|C|1195

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 1I

30S ribosomal protein S10

Chain 2E

30S ribosomal protein S3

Chain 4E

30S ribosomal protein S5

Chain 4K

mRNA

Chain 5I

30S ribosomal protein S14 type Z

Chain 8E

30S ribosomal protein S9