3D structure

PDB id
4WZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-fMet and mRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CCGC*GUGG
Length
8 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WZO_110 not in the Motif Atlas
Geometric match to IL_1D4R_001
Geometric discrepancy: 0.1693
The information below is about IL_1D4R_001
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_15225.2
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
39

Unit IDs

4WZO|1|14|C|1040
4WZO|1|14|C|1041
4WZO|1|14|G|1042
4WZO|1|14|C|1043
*
4WZO|1|14|G|1112
4WZO|1|14|U|1113
4WZO|1|14|G|1114
4WZO|1|14|G|1115

Current chains

Chain 14
23S ribosomal RNA

Nearby chains

Chain 59
50S ribosomal protein L6
Chain D5
50S ribosomal protein L25

Coloring options:


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