IL_4WZO_113

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UCUGG*CCAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_113 not in the Motif Atlas

Geometric match to IL_7VYX_008

Geometric discrepancy: 0.3403

The information below is about IL_7VYX_008

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_49751.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

4WZO|1|14|U|1165
4WZO|1|14|C|1166
4WZO|1|14|U|1167
4WZO|1|14|G|1168
4WZO|1|14|G|1169
*
4WZO|1|14|C|1180
4WZO|1|14|C|1181
4WZO|1|14|A|1182
4WZO|1|14|G|1183
4WZO|1|14|G|1184

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 95

50S ribosomal protein L21

Chain H5

50S ribosomal protein L30