IL_4WZO_182

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_182 not in the Motif Atlas

Homologous match to IL_7RQB_110

Geometric discrepancy: 0.1141

The information below is about IL_7RQB_110

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_83162.5

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

4WZO|1|14|U|2847
4WZO|1|14|G|2848
4WZO|1|14|U|2849
4WZO|1|14|A|2850
4WZO|1|14|A|2851
4WZO|1|14|G|2852
*
4WZO|1|14|U|2865
4WZO|1|14|U|2866
4WZO|1|14|G|2867
4WZO|1|14|A|2868
4WZO|1|14|G|2869

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 1G

Small subunit ribosomal RNA; SSU rRNA

Chain 55

50S ribosomal protein L17

Chain 75

50S ribosomal protein L19