3D structure

PDB id
4WZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complex of 70S ribosome with tRNA-fMet and mRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
UGAAAGACC*GGGGGAG
Length
16 nucleotides
Bulged bases
4WZO|1|1G|A|632
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4WZO_218 not in the Motif Atlas
Homologous match to IL_4LFB_026
Geometric discrepancy: 0.5856
The information below is about IL_4LFB_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04211.1
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

4WZO|1|1G|U|605
4WZO|1|1G|G|606
4WZO|1|1G|A|607
4WZO|1|1G|A|608
4WZO|1|1G|A|609
4WZO|1|1G|G|610
4WZO|1|1G|A|611
4WZO|1|1G|C|612
4WZO|1|1G|C|613
*
4WZO|1|1G|G|627
4WZO|1|1G|G|628
4WZO|1|1G|G|629
4WZO|1|1G|G|630
4WZO|1|1G|G|631
4WZO|1|1G|A|632
4WZO|1|1G|G|633

Current chains

Chain 1G
16S ribosomal RNA

Nearby chains

Chain 32
30S ribosomal protein S4
Chain 72
30S ribosomal protein S8
Chain 7A
30S ribosomal protein S16

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