IL_4WZO_246

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCAGC*GG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_246 not in the Motif Atlas

Homologous match to IL_4LFB_049

Geometric discrepancy: 0.3406

The information below is about IL_4LFB_049

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_15052.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

8

Unit IDs

4WZO|1|1G|C|1128
4WZO|1|1G|C|1129
4WZO|1|1G|A|1130
4WZO|1|1G|G|1131
4WZO|1|1G|C|1132
*
4WZO|1|1G|G|1142
4WZO|1|1G|G|1143

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 82

30S ribosomal protein S9