IL_4WZO_278

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAAC*GAGUGAAAUAGAGC

Length

18 nucleotides

Bulged bases

4WZO|1|1H|U|504, 4WZO|1|1H|G|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_278 not in the Motif Atlas

Homologous match to IL_7RQB_014

Geometric discrepancy: 0.0629

The information below is about IL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60992.6

Basepair signature

cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L

Number of instances in this motif group

6

Unit IDs

4WZO|1|1H|G|481
4WZO|1|1H|A|482
4WZO|1|1H|A|483
4WZO|1|1H|C|484
*
4WZO|1|1H|G|496
4WZO|1|1H|A|497
4WZO|1|1H|G|498
4WZO|1|1H|U|499
4WZO|1|1H|G|500
4WZO|1|1H|A|501
4WZO|1|1H|A|502
4WZO|1|1H|A|503
4WZO|1|1H|U|504
4WZO|1|1H|A|505
4WZO|1|1H|G|506
4WZO|1|1H|A|507
4WZO|1|1H|G|508
4WZO|1|1H|C|509

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain E8

50S ribosomal protein L22

Chain G8

50S ribosomal protein L24