IL_4WZO_400

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGCUGAC*GGUGGAG

Length

14 nucleotides

Bulged bases

4WZO|1|14|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_400 not in the Motif Atlas

Homologous match to IL_9DFE_024

Geometric discrepancy: 0.1714

The information below is about IL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68243.1

Basepair signature

cWW-L-cWW-cWW-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

4WZO|1|14|C|844
4WZO|1|14|G|845
4WZO|1|14|C|846
4WZO|1|14|U|847
4WZO|1|14|G|848
4WZO|1|14|A|849
4WZO|1|14|C|850
*
4WZO|1|14|G|928
4WZO|1|14|G|929
4WZO|1|14|U|930
4WZO|1|14|G|931
4WZO|1|14|G|932
4WZO|1|14|A|933
4WZO|1|14|G|934

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain H5

50S ribosomal protein L30