IL_4WZO_409

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCGAGC*GCGGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_409 not in the Motif Atlas

Geometric match to IL_8CRE_028

Geometric discrepancy: 0.3592

The information below is about IL_8CRE_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85536.2

Basepair signature

cWW-tSH-L-R-tHS-cWW-cWW

Number of instances in this motif group

8

Unit IDs

4WZO|1|14|C|2466
4WZO|1|14|C|2467
4WZO|1|14|G|2468
4WZO|1|14|A|2469
4WZO|1|14|G|2470
4WZO|1|14|C|2471
*
4WZO|1|14|G|2479
4WZO|1|14|C|2480
4WZO|1|14|G|2481
4WZO|1|14|G|2482
4WZO|1|14|C|2483
4WZO|1|14|G|2484

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 45

50S ribosomal protein L16