IL_4WZO_423

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAG*CAGGG

Length

9 nucleotides

Bulged bases

4WZO|1|1H|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WZO_423 not in the Motif Atlas

Homologous match to IL_5J7L_296

Geometric discrepancy: 0.5994

The information below is about IL_5J7L_296

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_58112.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

4WZO|1|1H|C|1432
4WZO|1|1H|U|1433
4WZO|1|1H|A|1434
4WZO|1|1H|G|1435
*
4WZO|1|1H|C|1557
4WZO|1|1H|A|1558
4WZO|1|1H|G|1559
4WZO|1|1H|G|1560
4WZO|1|1H|G|1561

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains