IL_4XEJ_044
3D structure
- PDB id
- 4XEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IRES bound to bacterial Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 4XEJ|1|A16S|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4XEJ_044 not in the Motif Atlas
- Homologous match to IL_4LFB_046
- Geometric discrepancy: 0.254
- The information below is about IL_4LFB_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 129
Unit IDs
4XEJ|1|A16S|C|1060
4XEJ|1|A16S|G|1061
*
4XEJ|1|A16S|C|1195
4XEJ|1|A16S|U|1196
4XEJ|1|A16S|G|1197
Current chains
- Chain A16S
- 16S ribosomal RNA
Nearby chains
- Chain AS03
- 30S ribosomal protein S3
- Chain AS05
- 30S ribosomal protein S5
- Chain AS09
- 30S ribosomal protein S9
- Chain AS10
- 30S ribosomal protein S10
- Chain AS14
- 30S ribosomal protein S14
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