IL_4XEJ_170

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGU*GCACG

Length

8 nucleotides

Bulged bases

4XEJ|1|A23S|A|2572, 4XEJ|1|A23S|C|2573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|A23S|C|2512
4XEJ|1|A23S|G|2513
4XEJ|1|A23S|U|2514
*
4XEJ|1|A23S|G|2570
4XEJ|1|A23S|C|2571
4XEJ|1|A23S|A|2572
4XEJ|1|A23S|C|2573
4XEJ|1|A23S|G|2574

Current chains

Chain A23S

23S ribosomal RNA

Nearby chains

Chain AL03

50S ribosomal protein L3

Chain AL13

50S ribosomal protein L13