IL_4XEJ_189
3D structure
- PDB id
- 4XEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IRES bound to bacterial Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- GUUCCC*GAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4XEJ_189 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.4124
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
4XEJ|1|A5S|G|33
4XEJ|1|A5S|U|34
4XEJ|1|A5S|U|35
4XEJ|1|A5S|C|36
4XEJ|1|A5S|C|37
4XEJ|1|A5S|C|38
*
4XEJ|1|A5S|G|44
4XEJ|1|A5S|A|45
4XEJ|1|A5S|A|46
4XEJ|1|A5S|C|47
4XEJ|1|A5S|A|48
4XEJ|1|A5S|C|49
Current chains
- Chain A5S
- 5S ribosomal RNA
Nearby chains
- Chain A23S
- Large subunit ribosomal RNA; LSU rRNA
- Chain AL05
- 50S ribosomal protein L5
- Chain AL18
- 50S ribosomal protein L18
Coloring options: