IL_4XEJ_191
3D structure
- PDB id
- 4XEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IRES bound to bacterial Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- UGG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4XEJ_191 not in the Motif Atlas
- Geometric match to IL_7A0S_107
- Geometric discrepancy: 0.3185
- The information below is about IL_7A0S_107
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_71625.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
4XEJ|1|A5S|U|80
4XEJ|1|A5S|G|81
4XEJ|1|A5S|G|82
*
4XEJ|1|A5S|C|94
4XEJ|1|A5S|U|95
4XEJ|1|A5S|G|96
Current chains
- Chain A5S
- 5S ribosomal RNA
Nearby chains
- Chain A23S
- Large subunit ribosomal RNA; LSU rRNA
- Chain AL16
- 50S ribosomal protein L16
- Chain AL25
- 50S ribosomal protein L25
- Chain AL30
- 50S ribosomal protein L30
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